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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015868471.1_cds_XP_016433467.1_29622
CDS Infomation

[gene=LOC107759965] [db_xref=GeneID:107759965] [protein=gamma aminobutyrate transaminase 3, chloroplastic-like] [partial=5'] [exception=annotated by transcript or proteomic data] [protein_id=XP_016433467.1] [location=join(<3782..3855,3948..3986,4075..4163,4247..4323,4410..4484,4764..4895,4975..5062,5147..5225,5502..5592,5677..5755,5836..5951,6122..6193)] [gbkey=CDS]
Sequence

GTGAAGCTGGTATGGTATTACAACAATGCTCTTGGAAGGCCTAACAAAAAGAAATTTATA
GCTCGAGCAAAAGCATATCATGGTTCAACTCTTATTTCTGCCAGTCTCACTGGTCTTCCT
GCACTGCATCAAAAATTTGATCTTCCTGCTCCATTTGTACTGCACACTGACTGCCCTCAT
TATTGGCGCTATCATCTGCCAGGTGAGACGGAGGAGGAGTTCTCAACCAGGTTGGCTAAA
AATCTGGAAGATCTTATCCTCAAAGAGGGGCCTGAAACAATAGCTGCTTTCATTGCTGAA
CCAGTCATGGGGGCAGGAGGTGTCATACCTCCTCCAGCAACTTATTTTGACAAGATCCAA
GCTGTGGTGAAGAAATATGACATTCTTTTCATAGCGGATGAGGTCATCTGTGCCTTTGGG
AGGCTTGGAACAATGTTTGGCTGTGACAAGTATAACATCAAGCCCGATCTTGTCTCCCTA
GCCAAGGCTCTTTCTTCTGCATATATGCCAATTGGAGCTGTCCTTGTAAGCCCTGAAGTT
TCTGATGTAATATATTCTCAAAGCAATAAACTTGGTTCCTTTTCTCATGGATTCACATAT
TCTGGGCATCCTGTGTCATGCGCGGTGGCATTGGAAGCTCTTAAGATCTACAAGGAACGA
AATATTGTTGAGAAAGTAAATAGAATATCCCCAAAGTTCCAAGAAGGTCTGAAGGCGTTT
TCTGACAGTCCCATAGTCGGAGAGATTAGGGGAACTGGTTTGATCCTCGCAACGGAGTTT
GCGGATAACAAATCTCCTAATGATCCTTTCCCTCCTGAATGGGGTATTGGTGCATATTTT
GGAGCACAGTGTGAGAAGAATGGTATGTTGGTACGTGTTGCTGGTGATACCATAATGATG
TCTCCACCATTTATAGTGACTCCAGAAGAACTTGATGAGTTGATTAGCATCTATGGGAAA
GCATTAAAGGAAACTGAAAAAAGGGTGGAAGAATTCAAGTCTCGGAAGTAA

Peptide Sequence

PEP ID

XP_016433467.1
PEP Infomation

PREDICTED: gamma aminobutyrate transaminase 3, chloroplastic-like [Nicotiana tabacum]
Sequence

MAKITSLIGSGIIAATNQVGSHISAISNLQKQIVCDPIQVRWSSTETSLKNDISSADIRG
YKGHDMLAPFTAGWQTTDVDPLVIQKSEGSYVYDINGKKYLDALAGLWCTALGGNEPRLV
AAATKQLNELPFYHSFWNRTTKPSLDLAKELLDMFTANKMAKAFFTNSGSEANDTQVKLV
WYYNNALGRPNKKKFIARAKAYHGSTLISASLTGLPALHQKFDLPAPFVLHTDCPHYWRY
HLPGETEEEFSTRLAKNLEDLILKEGPETIAAFIAEPVMGAGGVIPPPATYFDKIQAVVK
KYDILFIADEVICAFGRLGTMFGCDKYNIKPDLVSLAKALSSAYMPIGAVLVSPEVSDVI
YSQSNKLGSFSHGFTYSGHPVSCAVALEALKIYKERNIVEKVNRISPKFQEGLKAFSDSP
IVGEIRGTGLILATEFADNKSPNDPFPPEWGIGAYFGAQCEKNGMLVRVAGDTIMMSPPF
IVTPEELDELISIYGKALKETEKRVEEFKSRK

Transcript Sequence

Gene sequence data has not been registered.